Viro-Genome Browser
Click on one of the strain names below to view the corresponding genome in the GBrowse browser. Tutorial available here.
Pseudorabies virus (PRV) (Suid herpesvirus (SuHV-1)) Genomes
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A highly passaged vaccine strain, derived from the original Aujeszky strain.
Isolated in Hungary by Bartha, A. Magy. Allatorv. Lapja. 1961; 16:42-45. -
A virulent field isolate from dog, with extensive laboratory passage.
Isolated at Iowa State University (USA) by Platt KB et al. Arch Virol. 1979; 60(1):13-23. -
A virulent strain with extensive laboratory passage, originally obtained from R.F. Haff and thus potentially of Aujesky (Hungarian) strain origin.
Described in USA by Kaplan, AS and Vatter, AE. Virol. 1959; 7(4):394-407. -
The original PRV genome used data from six strains; ~80% strain Kaplan and the rest from Becker, NIA-3, TNL, Rice, and In-Fh.
Described by Klupp et al. J Virol. 2004; 78(1):424-40.
A wide extent of inter-strain diversity in virulent and vaccine strains of alphaherpesviruses.
PLoS Pathog 7(10): e1002282Department of Molecular Biology & Lewis Sigler Institute for Integrative Genomics at Princeton University
% coding variation in PRV genes, relative to reference strain Kaplan
ORF-1
| UL54
| UL53
| UL52
| UL51
| UL50
| UL49.5
| UL49
| UL48
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| UL46
| UL27
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| UL36
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| UL40
| UL41
| UL42
| UL43
| UL44
| UL26.5
| UL26
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| UL15
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| UL10
| UL9
| UL8
| UL7
| UL6
| UL5
| UL4
| UL3.5
| UL3
| UL2
| UL1
| EP0
| IE180
| US1
| US3
| US4
| US6
| US7
| US8
| US9
| US2