Nearest Neighbor Networks

Welcome to the home page of Nearest Neighbor Networks:

Huttenhower, C., Flamholz, A., Landis, J., Sahi, S., Myers, C., Olszewski, K., Hibbs, M., Siemers, N., Troyanskaya, O., Coller, H., "Nearest Neighbor Networks: Clustering Expression Data Based on Gene Neighborhoods", BMC Bioinformatics 8:250, 2007
There's not a lot here because it's mostly in our paper (linked above) or in our software and manual (linked below). NNN is licensed under the Creative Commons Attributions 2.5 license, which means you can use it for pretty much anything as long as you cite us. What you're probably looking for are: NNN requires Java 1.5 or greater.